Interaction network for NGA172
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Show the eQTL profiles of traits with a LOD score above the threshold at the selected locus.
Trait (count=53) Type Name LOD score Position Description
AT2G07690 gene MCM5 3.81 2:03522984 Member of the minichromosome maintenance complex%2C involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1%2C S and G2 phases of the cell cycle%2C and are released into the cytoplasmic compartment during mitosis. Binds chromatin.
AT5G42980 gene TRX3 3.73 5:17242607 encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.
AT3G28070 gene UMAMIT46 3.49 3:10447845 nodulin MtN21-like transporter family protein
AT1G36395 gene 3.36 1:13707880 transposable element gene [Source:TAIR;Acc:AT1G36395]
AT5G19120 gene 3.31 5:06414488 Eukaryotic aspartyl protease family protein%3B FUNCTIONS IN: aspartic-type endopeptidase activity%3B INVOLVED IN: proteolysis%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109)%2C Peptidase aspartic%2C catalytic (InterPro:IPR009007)%2C Peptidase A1 (InterPro:IPR001461)%3B BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G03220.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G24275 gene 3.24 4:12588378 Identified as a screen for stress-responsive genes.
AT1G17230 gene 3.15 1:05890616 Leucine-rich receptor-like protein kinase family protein%3B FUNCTIONS IN: protein serine/threonine kinase activity%2C protein kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C Leucine-rich repeat-containing N-terminal domain%2C type 2 (InterPro:IPR013210)%2C Leucine-rich repeat (InterPro:IPR001611)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C Leucine-rich repeat%2C typical subtype (InterPro:IPR003591)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%3B BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G63930.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G17070 gene 3.12 4:09595337 peptidyl-prolyl cis-trans isomerases%3B FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity%3B INVOLVED IN: response to oxidative stress%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891)%2C Peptidyl-prolyl cis-trans isomerase%2C cyclophilin-type (InterPro:IPR002130)%3B Has 214 Blast hits to 208 proteins in 48 species: Archae - 0%3B Bacteria - 43%3B Metazoa - 9%3B Fungi - 0%3B Plants - 153%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink).
AT5G56540 gene AGP14 3.09 5:22893151 Encodes arabinogalactan protein (AGP14). Mutants exhibit longer root hairs.
AT5G13890 gene 3.09 5:04478787 Family of unknown function (DUF716) %3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF716 (InterPro:IPR006904)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32120.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G39230 gene 3.07 4:18265735 encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER)%2C which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.
AT1G30330 gene ARF6 3.07 1:10685822 Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.
AT1G74720 gene QKY 3.04 1:28074927 Encodes a putative transmembrane protein carrying four C(2) domains%2C suggesting that QKY may function in membrane trafficking in a Ca(2+)-dependent fashion. Mutant analysis shows that this gene is involved in organ development.
AT5G20110 gene 3.01 5:06791360 Dynein light chain type 1 family protein%3B FUNCTIONS IN: microtubule motor activity%3B INVOLVED IN: microtubule-based process%3B LOCATED IN: microtubule associated complex%3B EXPRESSED IN: 19 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: Dynein light chain%2C type 1/2 (InterPro:IPR001372)%3B BEST Arabidopsis thaliana protein match is: Dynein light chain type 1 family protein (TAIR:AT1G23220.1)%3B Has 1201 Blast hits to 1201 proteins in 224 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 594%3B Fungi - 104%3B Plants - 259%3B Viruses - 0%3B Other Eukaryotes - 244 (source: NCBI BLink).
AT5G66200 gene ARO2 3.00 5:26453276 Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues%2C anthers and ovules.
AT4G10650 gene -3.00 4:06573792 P-loop containing nucleoside triphosphate hydrolases superfamily protein%3B FUNCTIONS IN: GTP binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: intracellular%3B CONTAINS InterPro DOMAIN/s: GTP-binding protein%2C HSR1-related (InterPro:IPR002917)%3B BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G41670.1)%3B Has 3555 Blast hits to 3555 proteins in 1390 species: Archae - 105%3B Bacteria - 2228%3B Metazoa - 282%3B Fungi - 444%3B Plants - 117%3B Viruses - 0%3B Other Eukaryotes - 379 (source: NCBI BLink).
AT2G26430 gene RCY1 -3.02 2:11243128 Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast.
AT3G51110 gene -3.02 3:18983626 Tetratricopeptide repeat (TPR)-like superfamily protein%3B FUNCTIONS IN: binding%3B INVOLVED IN: RNA processing%3B LOCATED IN: intracellular%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990)%2C RNA-processing protein%2C HAT helix (InterPro:IPR003107)%2C Tetratricopeptide repeat-containing (InterPro:IPR013026)%3B BEST Arabidopsis thaliana protein match is: crooked neck protein%2C putative / cell cycle protein%2C putative (TAIR:AT5G41770.1)%3B Has 4310 Blast hits to 1959 proteins in 231 species: Archae - 3%3B Bacteria - 10%3B Metazoa - 1644%3B Fungi - 1320%3B Plants - 755%3B Viruses - 0%3B Other Eukaryotes - 578 (source: NCBI BLink).
AT5G23330 gene -3.02 5:07854056 Nucleotidylyl transferase superfamily protein%3B FUNCTIONS IN: FMN adenylyltransferase activity%3B INVOLVED IN: riboflavin biosynthetic process%3B EXPRESSED IN: 13 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729)%2C FAD synthetase (InterPro:IPR015864)%3B BEST Arabidopsis thaliana protein match is: Nucleotidylyl transferase superfamily protein (TAIR:AT5G08340.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G63320 gene NPX1 -3.03 5:25373955 Encodes NPX1 (Nuclear Protein X1)%2C a nuclear factor regulating abscisic acid responses.
AT1G69935 gene SHW1 -3.04 1:26341494 Encodes a nuclear localized serine-arginine-aspartate-rich protein that acts as a negative regulator of photomorphogenesis.
AT1G44980 gene PME7 -3.05 1:17004256 pectin methylesterase 7 (PME7)%3B FUNCTIONS IN: pectinesterase activity%3B INVOLVED IN: cell wall modification%3B LOCATED IN: cell wall%2C plant-type cell wall%3B EXPRESSED IN: flower%3B CONTAINS InterPro DOMAIN/s: Pectin lyase fold/virulence factor (InterPro:IPR011050)%2C Pectinesterase%2C catalytic (InterPro:IPR000070)%2C Pectin lyase fold (InterPro:IPR012334)%3B BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT4G03930.1)%3B Has 2274 Blast hits to 2269 proteins in 274 species: Archae - 6%3B Bacteria - 470%3B Metazoa - 1%3B Fungi - 61%3B Plants - 1727%3B Viruses - 0%3B Other Eukaryotes - 9 (source: NCBI BLink).
AT3G26350 gene -3.06 3:09653660 LOCATED IN: chloroplast%3B EXPRESSED IN: root%2C pedicel%2C carpel%2C stamen%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein%2C group 2 (InterPro:IPR004864)%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13050.1)%3B Has 3534 Blast hits to 2704 proteins in 342 species: Archae - 6%3B Bacteria - 192%3B Metazoa - 1076%3B Fungi - 505%3B Plants - 1162%3B Viruses - 224%3B Other Eukaryotes - 369 (source: NCBI BLink).
AT3G19900 gene -3.07 3:06922470 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3067 (InterPro:IPR021420)%3B Has 276 Blast hits to 276 proteins in 83 species: Archae - 0%3B Bacteria - 112%3B Metazoa - 0%3B Fungi - 2%3B Plants - 59%3B Viruses - 0%3B Other Eukaryotes - 103 (source: NCBI BLink).
AT4G09580 gene -3.07 4:06052352 SNARE associated Golgi protein family%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endoplasmic reticulum%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein (InterPro:IPR015414)%3B BEST Arabidopsis thaliana protein match is: SNARE associated Golgi protein family (TAIR:AT1G71940.1)%3B Has 2802 Blast hits to 2802 proteins in 773 species: Archae - 6%3B Bacteria - 1625%3B Metazoa - 227%3B Fungi - 38%3B Plants - 230%3B Viruses - 0%3B Other Eukaryotes - 676 (source: NCBI BLink).
AT2G02360 gene PP2-B10 -3.08 2:00619323 Encodes an F-box protein containing a Nictaba-related lectin domain that can act as a carbohydrate-binding protein.
AT4G11660 gene AT-HSFB2B -3.10 4:07042354 member of Heat Stress Transcription Factor (Hsf) family
AT1G69060 gene -3.10 1:25964319 Chaperone DnaJ-domain superfamily protein%3B FUNCTIONS IN: heat shock protein binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: cultured cell%3B CONTAINS InterPro DOMAIN/s: Heat shock protein DnaJ%2C N-terminal (InterPro:IPR001623)%3B Has 3526 Blast hits to 2426 proteins in 300 species: Archae - 4%3B Bacteria - 245%3B Metazoa - 1133%3B Fungi - 271%3B Plants - 159%3B Viruses - 2%3B Other Eukaryotes - 1712 (source: NCBI BLink).
AT2G26310 gene FAP2 -3.12 2:11201303 Encodes a plastid stroma localized fatty acid binding protein.
AT4G13730 gene -3.14 4:07970177 Ypt/Rab-GAP domain of gyp1p superfamily protein%3B FUNCTIONS IN: RAB GTPase activator activity%3B INVOLVED IN: regulation of Rab GTPase activity%3B LOCATED IN: intracellular%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195)%3B BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT1G04830.1)%3B Has 3916 Blast hits to 3820 proteins in 228 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 1945%3B Fungi - 714%3B Plants - 575%3B Viruses - 0%3B Other Eukaryotes - 680 (source: NCBI BLink).
AT5G43660 gene -3.14 5:17535970 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein%3B FUNCTIONS IN: oxidoreductase activity%2C acting on paired donors%2C with incorporation or reduction of molecular oxygen%2C iron ion binding%2C L-ascorbic acid binding%3B INVOLVED IN: oxidation reduction%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Prolyl 4-hydroxylase%2C alpha subunit (InterPro:IPR006620)%3B BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G48740.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT2G30530 gene -3.16 2:13008856 unknown protein%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01970.1)%3B Has 5513 Blast hits to 872 proteins in 154 species: Archae - 0%3B Bacteria - 30%3B Metazoa - 615%3B Fungi - 144%3B Plants - 149%3B Viruses - 12%3B Other Eukaryotes - 4563 (source: NCBI BLink).
AT3G25882 gene NIMIN-2 -3.17 3:09470357 encodes a kinase that physically interacts with NPR1/NIM1
AT5G25210 gene -3.17 5:08723912 unknown protein%3B BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32030.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT5G07070 gene CIPK2 -3.24 5:02196428 Encodes CBL-interacting protein kinase 2 (CIPK2).
AT5G18850 gene -3.25 5:06286732 unknown protein%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink).
AT4G10330 gene -3.27 4:06406495 glycine-rich protein%3B Has 3957 Blast hits to 1040 proteins in 164 species: Archae - 18%3B Bacteria - 176%3B Metazoa - 2052%3B Fungi - 68%3B Plants - 1288%3B Viruses - 62%3B Other Eukaryotes - 293 (source: NCBI BLink).
AT3G49640 gene -3.28 3:18400257 Aldolase-type TIM barrel family protein%3B FUNCTIONS IN: tRNA dihydrouridine synthase activity%2C FAD binding%2C catalytic activity%3B INVOLVED IN: regulation of nitrogen utilization%2C oxidation reduction%2C tRNA processing%2C metabolic process%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785)%2C tRNA-dihydrouridine synthase (InterPro:IPR001269)%2C tRNA-dihydrouridine synthase%2C conserved site (InterPro:IPR018517)%3B BEST Arabidopsis thaliana protein match is: FMN-linked oxidoreductases superfamily protein (TAIR:AT5G67220.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT4G19400 gene -3.33 4:10580827 Profilin family protein%3B FUNCTIONS IN: actin binding%3B INVOLVED IN: cytoskeleton organization%3B LOCATED IN: actin cytoskeleton%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Profilin/allergen (InterPro:IPR002097)%3B BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT4G19410.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink).
AT1G64107 gene -3.37 1:23796066 Encodes a defensin-like (DEFL) family protein.
AT4G29490 gene -3.41 4:14487883 Metallopeptidase M24 family protein%3B FUNCTIONS IN: manganese ion binding%2C aminopeptidase activity%3B INVOLVED IN: cellular process%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Peptidase M24B%2C X-Pro dipeptidase/aminopeptidase P N-terminal (InterPro:IPR007865)%2C Peptidase M24%2C structural domain (InterPro:IPR000994)%3B BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT1G09300.1)%3B Has 11688 Blast hits to 11680 proteins in 2580 species: Archae - 275%3B Bacteria - 8182%3B Metazoa - 386%3B Fungi - 373%3B Plants - 96%3B Viruses - 0%3B Other Eukaryotes - 2376 (source: NCBI BLink).
AT4G09984 gene LCR34 -3.42 4:06254210 Encodes a member of a family of small%2Csecreted%2C cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.
AT3G05932 gene -3.46 3:01770239 Potential natural antisense gene%2C locus overlaps with AT3G05930
AT4G03230 gene -3.53 4:01418841 S-locus lectin protein kinase family protein%3B FUNCTIONS IN: sugar binding%2C protein serine/threonine kinase activity%2C protein kinase activity%2C kinase activity%2C ATP binding%3B INVOLVED IN: protein amino acid phosphorylation%2C recognition of pollen%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: 9 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480)%2C PAN-2 domain (InterPro:IPR013227)%2C Apple-like (InterPro:IPR003609)%2C S-locus receptor kinase%2C C-terminal (InterPro:IPR021820)%2C Serine/threonine-protein kinase domain (InterPro:IPR002290)%2C EGF-like%2C type 3 (InterPro:IPR000742)%2C Serine/threonine-protein kinase-like domain (InterPro:IPR017442)%2C Serine/threonine-protein kinase%2C active site (InterPro:IPR008271)%2C Protein kinase-like domain (InterPro:IPR011009)%2C Protein kinase%2C catalytic domain (InterPro:IPR000719)%2C S-locus glycoprotein (InterPro:IPR000858)%2C Tyrosine-protein kinase%2C catalytic domain (InterPro:IPR020635)%3B BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT1G11340.1)%3B Has 120947 Blast hits to 117758 proteins in 4568 species: Archae - 89%3B Bacteria - 13334%3B Metazoa - 43594%3B Fungi - 9240%3B Plants - 36995%3B Viruses - 386%3B Other Eukaryotes - 17309 (source: NCBI BLink).
AT1G75960 gene -3.54 1:28517939 AMP-dependent synthetase and ligase family protein%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: metabolic process%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 10 growth stages%3B CONTAINS InterPro DOMAIN/s: AMP-binding%2C conserved site (InterPro:IPR020845)%2C AMP-dependent synthetase/ligase (InterPro:IPR000873)%3B BEST Arabidopsis thaliana protein match is: acyl activating enzyme 5 (TAIR:AT5G16370.1)%3B Has 76139 Blast hits to 69900 proteins in 3519 species: Archae - 1138%3B Bacteria - 49873%3B Metazoa - 3177%3B Fungi - 3318%3B Plants - 2164%3B Viruses - 1%3B Other Eukaryotes - 16468 (source: NCBI BLink).
AT5G66360 gene DIM1B -3.70 5:26510146 Encodes a mitochondrial rRNA dimethylase.
AT1G33340 gene -3.76 1:12087196 ENTH/ANTH/VHS superfamily protein%3B FUNCTIONS IN: phospholipid binding%2C clathrin binding%2C binding%2C phosphatidylinositol binding%3B INVOLVED IN: clathrin coat assembly%3B LOCATED IN: clathrin coat%3B EXPRESSED IN: 11 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Epsin-like%2C N-terminal (InterPro:IPR013809)%2C ANTH (InterPro:IPR011417)%2C ENTH/VHS (InterPro:IPR008942)%2C Clathrin adaptor%2C phosphoinositide-binding%2C GAT-like (InterPro:IPR014712)%3B BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G57200.1)%3B Has 380 Blast hits to 359 proteins in 25 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 2%3B Plants - 374%3B Viruses - 0%3B Other Eukaryotes - 4 (source: NCBI BLink).
AT2G33000 gene -3.78 2:14006135 ubiquitin-associated (UBA)/TS-N domain-containing protein-related%3B CONTAINS InterPro DOMAIN/s: UBA-like (InterPro:IPR009060)%3B BEST Arabidopsis thaliana protein match is: Ubiquitin-associated (UBA) protein (TAIR:AT2G33010.1)%3B Has 21 Blast hits to 10 proteins in 3 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1%3B Fungi - 0%3B Plants - 20%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink).
AT1G70150 gene -3.83 1:26416872 zinc ion binding%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C MYND-type (InterPro:IPR002893)%3B Has 188 Blast hits to 183 proteins in 50 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 69%3B Fungi - 18%3B Plants - 88%3B Viruses - 0%3B Other Eukaryotes - 13 (source: NCBI BLink).
AT4G13990 gene -3.84 4:08084162 Exostosin family protein%3B FUNCTIONS IN: catalytic activity%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cell wall%2C membrane%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 7 growth stages%3B CONTAINS InterPro DOMAIN/s: Exostosin-like (InterPro:IPR004263)%3B BEST Arabidopsis thaliana protein match is: Exostosin family protein (TAIR:AT2G20370.1)%3B Has 564 Blast hits to 563 proteins in 23 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 6%3B Fungi - 0%3B Plants - 547%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink).
AT4G28550 gene -4.10 4:14110799 Ypt/Rab-GAP domain of gyp1p superfamily protein%3B FUNCTIONS IN: RAB GTPase activator activity%3B INVOLVED IN: regulation of Rab GTPase activity%3B LOCATED IN: intracellular%3B EXPRESSED IN: sperm cell%2C root%2C flower%3B EXPRESSED DURING: 4 anthesis%2C petal differentiation and expansion stage%3B CONTAINS InterPro DOMAIN/s: RabGAP/TBC (InterPro:IPR000195)%3B BEST Arabidopsis thaliana protein match is: Ypt/Rab-GAP domain of gyp1p superfamily protein (TAIR:AT2G20440.2)%3B Has 4375 Blast hits to 4233 proteins in 225 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 2348%3B Fungi - 794%3B Plants - 640%3B Viruses - 0%3B Other Eukaryotes - 593 (source: NCBI BLink).
AT4G31870 gene GPX7 -4.29 4:15410078 Encodes glutathione peroxidase.
AT3G21810 gene -4.46 3:07684356 Zinc finger C-x8-C-x5-C-x3-H type family protein%3B FUNCTIONS IN: zinc ion binding%2C nucleic acid binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C CCCH-type (InterPro:IPR000571)%3B Has 904 Blast hits to 850 proteins in 161 species: Archae - 9%3B Bacteria - 40%3B Metazoa - 431%3B Fungi - 54%3B Plants - 83%3B Viruses - 2%3B Other Eukaryotes - 285 (source: NCBI BLink).